Hi 

I found out that some had made duplicated copy of the same dicom serie and I sorted it out with dcm2niix.

Best Regards

Knut Jørgen

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve <dgreve@mgh.harvard.edu>
Sent: Friday, February 25, 2022 7:46 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Checking for (invalid) multi-frame inputs... ERROR: input(s) cannot have multiple frames!

I'm not sure what question you are asking

        External Email - Use Caution        

Dear Freesurfer experts,  

 
 

I get this error when I am running FreeSurfer. 

 
 

 

Checking for (invalid) multi-frame inputs... 
ERROR: input(s) cannot have multiple frames! 
/home/knutjb/subjects/test/mri/orig/001.mgz has 4 frames 
If this is a multi-frame MEMPRAGE image, 
use mri_concat --rms to combine echo frames. 

 
 

It has a t1_sag_mprage sequence, and it also give this waning 

filesare not found to be different and cannot be sorted. 

 
 

In addition, I get these errors when importing using recon-all -i file -all -s test 

 
 

INFO: Found 770 files in //20210224_151919/5_t1_sag_mprage 
INFO: Scanning for Series Number 5 
Scanning Directory 
INFO: found 768 files in series 
INFO: loading series header info.  

 
 

When I am running mri_concat --rms I am able to run recon-all -all. 

 
 

Your sincerely, 

 

Knut Jørgen Bjuland  

 

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