Hi,<br>
<br>
I'm having a problem motion correcting my data.&nbsp; My runs have been
converted into .mgz files, and I run recon-all -motioncor -s
&lt;subjName&gt;, which runs smoothly until it starts averaging, at
which point I get the following:<br>
<br>
------------------------------------------------------------------------------------------<br>
Averaging<br>
Fri Mar&nbsp; 3 11:32:49 EST 2006<br>
/autofs/space/oldcask_003/users/gow/LEX02/aMRI_new/LEX02011<br>
inhibiting isotropic volume interpolation<br>
1 of 6: reading /autofs/space/oldcask_003/users/gow/LEX02/aMRI_new/LEX02011/mri/tmp-mri_mot ion_correct.fsl-9069/cor-1.img...<br>
2 of 6: reading /autofs/space/oldcask_003/users/gow/LEX02/aMRI_new/LEX02011/mri/tmp-mri_mot ion_correct.fsl-9069/cor-2.img...<br>
3 of 6: reading /autofs/space/oldcask_003/users/gow/LEX02/aMRI_new/LEX02011/mri/tmp-mri_mot ion_correct.fsl-9069/cor-3.img...<br>
INFO: analyzeRead(): min = 0, max = 940<br>
INFO: analyzeRead(): min = 0, max = 820.699<br>
frame = 1, slice = 0, k=128, row = 0<br>
nread = 0, nexpected = 256<br>
analyzeRead2(): error reading from file
/autofs/space/oldcask_003/users/gow/LEX02/aMRI_new/
LEX02011/mri/tmp-mri_motion_correct.fsl-9069/cor-3.img<br>
<br>
mri_average:
MRIread(/autofs/space/oldcask_003/users/gow/LEX02/aMRI_new/LEX02011/mri/tmp-mr
i_motion_correct.fsl-9069/cor-3.img) failed<br>
Linux oldcask 2.6.9-22.ELsmp #1 SMP Sat Oct 8 19:11:43 CDT 2005 i686 athlon i386 GNU/Linux<br>
<br>
recon-all exited with ERRORS at Fri Mar&nbsp; 3 11:33:10 EST 2006<br>
--------------------------------------------------<br>
<br>
This happens with all my subjects.&nbsp; Any suggestions as to what I'm doing wrong?<br>
<br>
Thanks,<br>
Jenn<br>