Sure. I should add that because the method is sequence agnostic doesn’t mean the results won’t be biased by differences in contrast in the input sequence.
Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu>
On Behalf Of AJ
Sent: Saturday, November 27, 2021 11:03 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] SynthSeg
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Many thanks.
Best
AJ
On Sat, Nov 27, 2021, 20:04 Fischl, Bruce <BFISCHL@mgh.harvard.edu> wrote:
Sorry, what is the “sb” in sbTIV? I’m sure you can use it from samseg, or just use samseg for the segmentation as well if you want, since it is agnostic with respect to MRI sequence as well.
Cheers
Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of AJ
Sent: Saturday, November 27, 2021 10:03 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] SynthSeg
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Hi
Thank you for your help. I ran SynthSeg successfully. How do you derive sbTIV value ? Could one use sbTIV from SAMSEG?
Many thanks
AJ
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