Hi,
I believe "recon-all -s NC -hippo-subfields" should do that.
Please let us know if it doesn't.
Koen
Dear FS experts,I've a query regarding the recon-all analysis.I ran recon-all using the following commandeg.recon-all -i location/nc.nii -s NC -allI got the analysis done.Now I'm interested to calculate the hippocampal structures.I knw the command line for that alsorecon-all -i location/nc.nii -s NC -all -hippo-subfieldsProblem for me is that I've 45 subjects. I ran recon-all without hippo-subfields commands.i.e. from motion correction to Ex-vivo Entorhinal Cortex Label rh. (log file)Is there any way to do hippo-sufields alone than running the whole steps again (which is very time consuming).Thanks in advance.
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