Looking through the documentation, there are extra options to include a T2 image to refine the pial surface boundary, but I was wondering if FreeSurfer can use a T2 in conjunction with a T1 to help refine the white matter/gray matter boundary? As in, gray matter
with higher myelin content than average could cause the white matter boundary to be placed further out than normal when just using a T1; can FreeSurfer currently use a T2 image to help prevent that at all? Thank you
-Matt
Matthew K. Defenderfer B.S. | Graduate Research Assistant