Thank you for this answer.

How should I load aparc a2009+aseg.mgz for visualization and load a color map with p-values?

If I  load the fsaverage with the command "tksurfer", then I can only load the lh.aparc.a2009s.annot label but I need Desikan and Killiany atlas and not Destrieux atlas and also the subcortical structures. I couldn't find any label comprising subcortical structures.

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Dear freesurfer experts,

I'm trying to display the results of a study on a brain with Desikan and Killiany parcellation.

Currently, I use tksurfer fsaverage, load the aparc.annot annotation, modify the colortable with values of interest and load it.

However, in this way I can display only cortical regions.

Any suggestions on how I could display cortical and subcortical regions at the same time? And where do I find an ordered list of cortical + subcortical structures to modify the values in each ROI?

Thank you in advance for your help.

Best,

Valentina

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