I would use mri_segstats and specify the --annot option
doug

On 05/28/2013 01:28 PM, Martijn Steenwijk wrote:
> Dear all,
>
> I've created a custom '.mgh' file containing values on the cortical
> surface using mri_vol2surf. I would like to compute some statistics on
> this surface in the aparc-areas computed by freesurfer. Can I then
> just use  mri_anatomical_stats with option -t specifying the custom
> mgh file as 'thickness' input? Or does mri_anatomical_stats something
> more complex than just averaging the values inside each region?
>
> Best,
> Martijn
>
>

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Douglas N. Greve, Ph.D.
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