---------- Forwarded message ----------
From: Cristian Paz <pazcristian99@gmail.com>
Date: 2013/8/14
Subject: Re: [Freesurfer] FS version
To: Bruce Fischl <fischl@nmr.mgh.harvard.edu>


Thank you for your reply!
now - on the third try, I left it for three hours without checking and now it is actually running fiurther.
great!

what types of problem do I risk if if I use different versions? Will it be correct if it successfully runs or could there be errors?

best,
Cris


2013/8/14 Bruce Fischl <fischl@nmr.mgh.harvard.edu>
how long do you wait? In general it's a bad idea to mix version

Bruce



On Wed, 14 Aug 2013, Cristian Paz wrote:

because every time  I try to run

recon-all -autorecon-pial -s 101
it seems to hang up here and nothing more happens :


____________________________________________________
#@# Sphere lh Wed Aug 14 14:42:06 CEST 2013
/media/Secure_HDD/patients/101/scripts

 mris_sphere -seed 1234 ../surf/lh.inflated ../surf/lh.sphere

setting seed for random number genererator to 1234
$Id: mris_sphere.c,v 1.57 2011/03/02 00:04:34 nicks Exp $
  $Id: mrisurf.c,v 1.693.2.2 2011/04/27 19:21:05 nicks Exp $
reading original vertex positions...
unfolding cortex into spherical form...
surface projected - minimizing metric distortion...
______________________________________________________

Could this have to do with FreeSurfer version maybe?

Cris


2013/8/14 Cristian Paz <pazcristian99@gmail.com>
      Dear experts!

I have a question.

I have run recon-all on a cluster , and I am editing on my local
machine. I just checked the versions and I see that I have:

freesurfer-x86_64-redhat-linux-gnu-stable5-20110522 at the computing
cluster and

freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 on my local
computer....

Is this a problem?

Thank you very much for your help.

Kind regards Cris






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