External Email - Use Caution        

Dear,

Can I use Freesurfer to convert aal atlas 3 from the MNI space to the native space of the T1 sequence?

Thanks.

Diógenes Bispo
Neuroradiologist



Em sáb., 29 de ago. de 2020 às 12:22, Fischl, Bruce <BFISCHL@mgh.harvard.edu> escreveu:

Hi Diógenes

 

If there are regions that are not in any of our parcellations that you want to obtain measures for, you can manually label them on the fsaverage surface, then use mri_label2label to map them to each individual subject and use mris_anatomical_stats -l <label name> to get the measures you want.

 

Cheers

Bruce

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Diógenes Bispo
Sent: Saturday, August 29, 2020 6:10 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Piriform gyrus and other regions of the olfactory pathway

 

        External Email - Use Caution        

Dear,

I would like to know how do I get thickness and cortical volume measurements of the piriform gyrus in Freesurfer version 7, as well as other regions of the olfactory pathway.

Thanks.


Diógenes Bispo

Neuroradiologist

 

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer