After running the longitudinal pipeline, it’s still not registered well.

Doug, I don’t think I should attach the figures here, but you take a look at the registration here:

freeview mg150.long.mg150_base/mri/T1.mgz mg150_postop.long.mg150_base/mri/T1.mgz

Where the folders are in /autofs/space/mmvtclin_001/thibault/1/users/npeled/subjects

Thanks!

Noam

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Douglas N. Greve
Sent: Monday, May 10, 2021 12:10 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Registering preop and postop MRI scans

Can you be more specific that "weren't really good"?

On 5/6/2021 12:03 PM, Peled, Noam wrote:

Dear group,

I have preop and postop MRI scans of an epileptic patient.

I ran recon-all on the preop, and bbregister on the postop to register it to the preop.

I’m not sure why, but the results weren’t really good.

Maybe I should try using the longitudinal pipeline?

Thanks,

Noam

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