That is correct, Tegan! And welcome to FreeSurfer ;-)
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
From: <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Tegan Hargreaves <thargrea@stjosham.on.ca>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Tuesday, February 11, 2020 at 14:55
To: "'freesurfer@nmr.mgh.harvard.edu'" <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Question re: hippocampal/amygdala subfields
External Email - Use Caution
Hi all,
I am fairly new to FreeSurfer and am implanting the hippocampal/amygdala subfields script in our participants. As there are two versions of the hippocampal script (i.e., version 10 that is only hippocampus and version 21 which is both),
I wanted to confirm that I should be using FS v6.0 (stable) for recon-all, and then running only the hippocampal/amygdala (v21) script through the dev version of FS. I don’t believe that I should be running the exclusively hippocampal script anymore, as the
guide states it is now obsolete, but I just wanted to confirm.
Thank you so much!
Best,
Tegan
Tegan Hargreaves, MSc
Research Assistant
Peter Boris Centre for Addictions Research | St. Joseph’s Healthcare Hamilton
100 West 5th Street, Hamilton, ON L8P 3P2
P: 905-522-1155 ext. 36368 | E:
thargrea@stjoes.ca
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