The paradigm info is in a file, not a folder (eg,
subject1/bold/003/taskname.par, subject1/bold/004/taskname.par,
subject5/bold/001/taskname.par). When you make an analysis
(mkanalysis-sess), you should then spcify the paradigm file with --par
taskname.par. mkanlaysis-sess is run without reference to the subjects.
Eg, the name of the analysis (--analysis analysisname) is independent of
the subject. Maybe you are confusing the analysisname and the paradigm?


On 2/25/19 9:50 AM, Zhi Li wrote:
>
>         External Email - Use Caution
>
> Thank you very much. You mean the generated paradigm folders (e.g.,
> taskname.sm05.lh) and analysis.info <http://analysis.info>,
> contrast.mat and contrast.config should be the same among all the
> subjects, even the onset and duration of each stimulus in each subject
> were different? Hence I could use the paradigm folders generated from
> the 1-st level modelling of any subjects in the 2-nd level modelling,
> is that correct?
>
> On Fri, 22 Feb 2019 at 16:35, Greve, Douglas N.,Ph.D.
> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> wrote:
>
>     While the name of the paradigm file must be the same across runs
>     and subjects, the contents paradigm file can be different. That
>     should be able to handle what you are doing
>
>     On 2/22/19 3:42 PM, Zhi Li wrote:
>>
>>             External Email - Use Caution
>>
>>     Hello FreeSurfer experts,
>>
>>     It seems that all the subjects adopt a single same paradigm file
>>     in FsFast, am I correct? So how to handle it if each subject has
>>     different paradigm files, e.g., different onset time and
>>     duration? I could do the first-level analysis in each individual
>>     data, however, I cannot concatenate data with 'isxconcat-sess'
>>     due to that there is not an analysis folder generated from a same
>>     paradigm file. Any suggestions?
>>
>>     Thanks and best regards,
>>
>>     Lizhi
>>
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