Use

mri_binarize --i aseg.mgz --match 17 --binval -1 --o your.lefthippo.nii.gz

Hi everyone,

I am working on Hippocampus segmentation using Neural Networks for that I need labeled images of Hippocampus corresponding to original images.

I am using OASIS Dataset for this. I want to generate labeled images using FREESURFER. Is there any way to label each 3D co-ordinate

HippoCampus -1

Otherwise - 0

Here are sample files link

Kindly help me!

Dilip Puri

IIIT Vadodara

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