After you load the image from the command-line, can you then load more images from the GUI?

Ruopeng

On Dec 20, 2022, at 3:23 AM, Addison, Reuben <RAddison@mghihp.edu> wrote:

The answer to this is question ‘ opening an image from the gui ‘ is yes. The image only opens when I open from the command line 

Reuben A. 
From: fsbuild <fsbuild@contbay.com>
Sent: Tuesday, December 20, 2022 7:56:12 AM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Cc: Addison, Reuben <RAddison@MGHIHP.EDU>
Subject: Re: [Freesurfer] Freeview quit unexpectedly
 

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By crashing from the GUI do you mean that you when you try to navigate to open a file, e.g.,   $SUBJECTS_DIR/bert/mri/brain.mgz,  using the freeview GUI Open-> pull down menu that you get the core dump listed below, but it works when your run “freeview  $SUBJECTS_DIR/bert/mri/brain.mgz” from the command line in the terminal window?

The core dump shows a memory allocation error on MacOSX.  Some postings indicate setting MallocNanoZone to zero before running your program/command can remedy this,

$ bash
$ export MallocNanoZone=0 && freeview

- but this may not work.   I don’t see any other workarounds for this right now.  I have not seen this error before with freeview on older versions of MacOS, so it may be related to running on MacOS 10.13.

- R.

On Dec 19, 2022, at 14:03, Addison, Reuben <RAddison@mghihp.edu> wrote:

I updated the Xquartz yet still same issue. Freeview only works with the command line but the gui is till crashing. 
 
Gkxgears seems to work fine
 
I have attached images of both the crash report and the graphics information about my mac.
 
Reuben A
 
 
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