I get the correlation result between two condition  of the functional data by using AFNI( I do not know how to do correlation by using freesurfer)
And then I use the bbregister to aline the correlation result (produce by Afni) to the anatomical result produced by using freesurfer.
Next I using mri_vol2surf to aline the each one's  functional result to the  fsaverage offer by freesurfer.
My question is :1 Should I need to do mri_vol2vol next for each subject?
                       2 I have two group of subjects. I want to know if there is some correlation different between them? What should I do next? 
Thanks very much!
Linda