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Hello Stephan,

There is some information here about packages to install in order to run freesurfer - see highlighted "apt-get install" commands.

https://surfer.nmr.mgh.harvard.edu/fswiki/BuildRequirements

I think you will also need to install these packages,

libjpeg62_6b2-3_amd64.deb

https://drive.google.com/file/d/1Zdd-C3EQEEww180OzxEk1WV0h9obZYkD/view?usp=sharing

libpng12-0_1.2.54-1ubuntu1_amd64.deb

https://drive.google.com/file/d/1OWQSWL8a3Y8f1Weiauj9Lr2d3mtvZOm5/view?usp=sharing

We also have an Ubuntu VM you can download. While you may prefer to run on your own Ubuntu machine, it could also serve as a reference for you to see what we installed on Ubuntu 18.04 (including those extra packages).

https://surfer.nmr.mgh.harvard.edu/fswiki/VM_67

- R.

On Apr 6, 2020, at 16:50, Stephan <stephan.wunderlich22@gmail.com> wrote:

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Hi,

ist there an official guideline how to install Freesurfer on Ubuntu?

Best,
Stephan
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