Dear Freesurfer experts,<br /><br />I'm using version 5.1 to segment some subjects, but I have one that is causing some troubles when executing the autorecon2 after some manual cleaning of non-brain tissue and some control points added, I always get the following error:<br /><br /><!--[if gte mso 9]&gt;&lt;xml&gt;
 &lt;w:WordDocument&gt;
  &lt;w:View&gt;Normal&lt;/w:View&gt;
  &lt;w:Zoom&gt;0&lt;/w:Zoom&gt;
  &lt;w:HyphenationZone&gt;21&lt;/w:HyphenationZone&gt;
  &lt;w:PunctuationKerning/&gt;
  &lt;w:ValidateAgainstSchemas/&gt;
  &lt;w:SaveIfXMLInvalid&gt;false&lt;/w:SaveIfXMLInvalid&gt;
  &lt;w:IgnoreMixedContent&gt;false&lt;/w:IgnoreMixedContent&gt;
  &lt;w:AlwaysShowPlaceholderText&gt;false&lt;/w:AlwaysShowPlaceholderText&gt;
  &lt;w:Compatibility&gt;
   &lt;w:BreakWrappedTables/&gt;
   &lt;w:SnapToGridInCell/&gt;
   &lt;w:WrapTextWithPunct/&gt;
   &lt;w:UseAsianBreakRules/&gt;
   &lt;w:DontGrowAutofit/&gt;
  &lt;/w:Compatibility&gt;
  &lt;w:BrowserLevel&gt;MicrosoftInternetExplorer4&lt;/w:BrowserLevel&gt;
 &lt;/w:WordDocument&gt;
&lt;/xml&gt;&lt;![endif]-->

<p class="MsoNormal"><font size="3"><span lang="EN-US">ERROR: _FindFacePath: could not find path!</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">Linux localhost.localdomain 2.6.9-34.ELsmp
#1 SMP Thu Mar 9 06:23:23 GMT 2006 x86_64 x86_64 x86_64 GNU/Linux</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">recon-all -s subj2_01_yr3_PEPA
exited with ERRORS at Wed Feb<span style="mso-spacerun:yes">  </span>5 02:41:04
CET 2014</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"></font><br /></p>I have tried to open the surfaces in tksurfer, the lh.orig looks real weird, also if I try to open both surfaces (lh.white and lh.orig) in tkmedit it outputs the next error:<br /><br /><!--[if gte mso 9]&gt;&lt;xml&gt;
 &lt;w:WordDocument&gt;
  &lt;w:View&gt;Normal&lt;/w:View&gt;
  &lt;w:Zoom&gt;0&lt;/w:Zoom&gt;
  &lt;w:HyphenationZone&gt;21&lt;/w:HyphenationZone&gt;
  &lt;w:PunctuationKerning/&gt;
  &lt;w:ValidateAgainstSchemas/&gt;
  &lt;w:SaveIfXMLInvalid&gt;false&lt;/w:SaveIfXMLInvalid&gt;
  &lt;w:IgnoreMixedContent&gt;false&lt;/w:IgnoreMixedContent&gt;
  &lt;w:AlwaysShowPlaceholderText&gt;false&lt;/w:AlwaysShowPlaceholderText&gt;
  &lt;w:Compatibility&gt;
   &lt;w:BreakWrappedTables/&gt;
   &lt;w:SnapToGridInCell/&gt;
   &lt;w:WrapTextWithPunct/&gt;
   &lt;w:UseAsianBreakRules/&gt;
   &lt;w:DontGrowAutofit/&gt;
  &lt;/w:Compatibility&gt;
  &lt;w:BrowserLevel&gt;MicrosoftInternetExplorer4&lt;/w:BrowserLevel&gt;
 &lt;/w:WordDocument&gt;
&lt;/xml&gt;&lt;![endif]-->

<p class="MsoNormal"><font size="3"><span lang="EN-US">tkmedit subj2_01_yr3_PEPA
brainmask.mgz lh.white -aux T1.mgz -aux-surface rh.white</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">Reading 640 control points...</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">Converting main surface: 100% done.</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">Converting main surface: 100% done.</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">mrisReadTriangleFile(/root/trabajo/freesurfer/subjects/subj2_01_yr3_PEPA/surf/lh.orig):
surface doesn't match /root/trabajo/freesurfer/subjects/subj2_01_yr3_PEPA/surf/lh.white</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">No such file or directory</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">mrisReadTriangleFile failed.</span></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"></font></p><font size="3">

</font><p class="MsoNormal"><font size="3"><span lang="EN-US">No such file or directory</span></font></p>

<!--[if gte mso 9]&gt;&lt;xml&gt;
 &lt;w:LatentStyles DefLockedState=&quot;false&quot; LatentStyleCount=&quot;156&quot;&gt;
 &lt;/w:LatentStyles&gt;
&lt;/xml&gt;&lt;![endif]--><!--[if gte mso 10]&gt;
&lt;style&gt;
 /* Style Definitions */
 table.MsoNormalTable
	{mso-style-name:&quot;Tabla normal&quot;;
	mso-tstyle-rowband-size:0;
	mso-tstyle-colband-size:0;
	mso-style-noshow:yes;
	mso-style-parent:&quot;&quot;;
	mso-padding-alt:0cm 5.4pt 0cm 5.4pt;
	mso-para-margin:0cm;
	mso-para-margin-bottom:.0001pt;
	mso-pagination:widow-orphan;
	font-size:10.0pt;
	font-family:&quot;Times New Roman&quot;;
	mso-ansi-language:#0400;
	mso-fareast-language:#0400;
	mso-bidi-language:#0400;}
&lt;/style&gt;
&lt;![endif]--><br />I have checked at the<font size="4"> s</font><font size="3"><span lang="EN-US"><font size="4">ubj2_01_yr3_PEPA</font></span></font><font size="4">/</font>surf folder and both surfaces exist. So, I don't have a clue on how to solve this.<br /><br />Does anyone has an idea how to fix this problem?<br /><br /><br />Many thanks in advanced,<br />Gabriel<br />