Dear Freesurfer experts, 

FREESURFER_HOME: /Applications/freesurfer

Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0

Kernel info: Darwin 14.5.0 x86_64


I received the following error while running the dt_recon --i 00010001 --s 40 --o /Users/jasminalves/Desktop/data/FREESURFER/40. 

The participant is 40. 

And I received the following error: 

WARNING: file /Users/jasminalves/Desktop/data/40/00010001 does not contain a Siemens ASCII header has this file been anonymized?

ERROR: cannot unpack mosiacs without ASCII header


I did notice on previous threads this is a common error that occurs, but the files I have were directly exported from our siemens scanner via Osirix. I also tried running dt_recon using nifti format but that resulted in an error as well. Is there anything else I can do?

Thanks,

Jasmin


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Jasmin Alves
Predoctoral Student 
Medical Biology Graduate Program 
University of Southern California