Dear professors,
I have installed freesurfer according to the description online. However, when display the a result by freeview, it did not show like usual.
The detailed information was followed.
First, I convert SPM result into the format that freeview can read. The following was command I use:
mri_vol2surf --mov ${AC}.nii.gz --mni152reg --hemi lh --o surf/lh.${AC}.z.fsaverage.nii.gz --trgsubject fsaverage --interp nearest --noreshape --cortex
mri_vol2surf --mov ${AC}.nii.gz --mni152reg --hemi rh --o surf/rh.${AC}.z.fsaverage.nii.gz --trgsubject fsaverage --interp nearest --noreshape --cortex
Second, I open freeview and then load surface with the lh.white/rh.white of "$FREESURFER_HOME/ subjects/fsaverages5/surf". However, when I overlay the result, which was in the attachment, and click configure overlay. It shows like this :
I don't know what to do now. Please guide me!