Dear FreeSurfer Developers and Community,
I recently ran recon-all-clinical using FreeSurfer version freesurfer-macOS-darwin_x86_64-8.0.0-beta-20241103-b8aacdc on a T1-weighted axial post-contrast MRI. However, I noticed that the choroid plexus is neither segmented nor labeled in the aseg.mgz or synthseg.mgz files in the final output.
I would greatly appreciate it if anyone could help me understand or resolve this issue. I have attached the log file for reference.
Thank you for your assistance.
Best regards,
Nima Taghizadeh Mortezaei, M.D.
Radiation Oncology Research Fellow, MGH