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If you do a case insensitive search for the string “error" in the log, you should see there are multiple listings of, 

IFLAG= -1  LINE SEARCH FAILED. SEE DOCUMENTATION OF ROUTINE MCSRCH ERROR RETURN OF LINE SEARCH: INFO= 4 POSSIBLE CAUSES: FUNCTION OR GRADIENT ARE INCORRECT OR INCORRECT TOLERANCES out of QuasiNewtonEMA: 008: -log(p) =   -0.0  tol 0.000010

This thread indicates it could be the skull stripping is not right, and should be checked,
https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg16992.html
- R.

On Jan 6, 2024, at 01:10, yunus soleymani <soleymani.yunus@yahoo.com> wrote:

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Hi Fargol,
I recently heard about some problems from my coworkers who were using Ubuntu 18 and version 7.2.0 of the software. However, I am currently using version 7.2.0 on Ubuntu 22.04.2 LTS, and it works well for me. You could try it out and see if it works for you as well.
bests,
Yunus


--------------------------------------------------------------------------------
Yunus Soleymani

Ph.D. Candidate of Neuroimaging 
Tehran University of Medical Sciences

+98 914 526 9298
--------------------------------------------------------------------------------



On Friday, January 5, 2024 at 10:05:54 PM GMT+3:30, Fargol Rezayaraghi <fargor@uw.edu> wrote:


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Hi FreeSurfer Team,
I hope this email finds you well. 

I'm trying to use a T1 image to get the aparc+aseg and wmparc nifti files. 

I was using this command:  recon-all -s Subject1 -i T1..nii - all -notal -check ( I used recon-all -s Subject1 -i T1.nii - all first, and after getting Talairach error, I added -nota -check at the end).

I'm getting the following messages without a clear error number: recon-all -s Subject1 exited with ERRORS at Thu Dec 14 21:18:02 EST 2023
For more details, see the log file /home/developer/Desktop/freesurfer/7.2.0/subjects/Subject1/scripts/recon-all.log
To report a problem, see MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

The version of the freesurfer: freesurfer-linux-ubuntu18_x86_64-7.2.0-20210721-aa8f76b

My platform is ubuntu 18_04_06 on Oracle VM VirtualBox

I've attached the log file. 

-- 
Kind Regards,
Fargol R. Araghi (Rezayaraghi)
Ph.D. Candidate, University of Washington
Department of Mechanical Engineering
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