Dear Devika,
The command is longHippoSubfieldsT1.sh. You can find the instructions here:
https://surfer.nmr.mgh.harvard.edu/fswiki/LongitudinalHippocampalSubfields
Cheers,
/Eugenio
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
From: <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Devika K <devikakuttala@gmail.com>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Saturday, April 4, 2020 at 13:31
To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Hippocampal subfield volumes.
External Email - Use Caution
Hi,
I want to extract hippocampal subfield volume from longitudinal samples. I ran recon-all-all with longitudinal pipeline for all those samples in
FreeSurfer 6.0.
How I need to process further (Commands that I need to follow).
Would you please help me out?
Regards
Devika K