that's a good point

On Wed, 16 Mar 2016, Martin Reuter wrote:

>
> Although it should be mentioned that outputs (even of subfields) are
> going to change due to differences in the regular freesurfer processing,
> as the subfields stream builds upon the regular FS stream.
>
> Best, Martin
>
>
> On 03/16/2016 10:52 AM, Eugenio Iglesias wrote:
>> I only changed some details (e.g., temporary directories) that do not affect the output.
>>
>>
>> Juan Eugenio Iglesias
>> Postdoctoral researcher BCBL
>> www.jeiglesias.com
>> www.bcbl.eu
>>
>> Legal disclaimer/Aviso legal/Lege-oharra: www.bcbl.eu/legal-disclaimer
>>
>> ----- Original Message -----
>> From: "Bruce Fischl" <fischl@nmr.mgh.harvard.edu>
>> To: "Freesurfer support list" <freesurfer@nmr.mgh.harvard.edu>
>> Sent: Wednesday, March 16, 2016 3:49:31 PM
>> Subject: Re: [Freesurfer] FreeSurfer 6.0
>>
>> yes, although the hippocampal stuff hasn't changed I don't think
>> (Eugenio: is that correct)?
>>
>> On Wed, 16 Mar 2016, Alan Francis wrote:
>>
>>> Bruce, with Eugenio's guidance, I downloaded 6.0 beta a few months ago and
>>> ran the HSF method successfully. Have they retracted that version?
>>>
>>> best,
>>>
>>> Alan
>>>
>>> On Wed, Mar 16, 2016 at 9:57 AM, Bruce Fischl <fischl@nmr.mgh.harvard.edu>
>>> wrote:
>>>        actually there is no beta yet, but hopefully within a week or so
>>>        On Wed, 16 Mar 2016, Alan Francis wrote:
>>>
>>>              Hi Elizabeth:
>>>
>>>              I ran the Hippocampal subfields on 6.0 beta. The
>>>              parcellation looks great.
>>>              Beta is available for download. Here is the URL:
>>>
>>>              https://surfer.nmr.mgh.harvard.edu/fswiki/Download
>>>
>>>              best,
>>>
>>>              Alan
>>>
>>>              On Wed, Mar 16, 2016 at 6:23 AM, Elisabeth Paul
>>>              <elisabeth.paul@student.uva.nl> wrote:
>>>                    Dear ladies and gentlemen,
>>>
>>>              for a research project I need to measure the volume
>>>              of the different
>>>              hippocampus subregions. I want to use FreeSurfer 6.0
>>>              for that but I
>>>              can only find FreeSurfer 5.3 online. Is FreeSurfer
>>>              6.0 not yet
>>>              released and if so, when will it be released? If it
>>>              is already
>>>              released, could you tell me where to find it?
>>>
>>>              Thank you very much in advance.
>>>
>>>              Kind regards,
>>>
>>>              Elisabeth Paul
>>>
>>>              _______________________________________________
>>>              Freesurfer mailing list
>>>              Freesurfer@nmr.mgh.harvard.edu
>>>              https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>
>>>
>>>              The information in this e-mail is intended only for
>>>              the person to whom
>>>              it is
>>>              addressed. If you believe this e-mail was sent to
>>>              you in error and the
>>>              e-mail
>>>              contains patient information, please contact the
>>>              Partners Compliance
>>>              HelpLine at
>>>              http://www.partners.org/complianceline . If the
>>>              e-mail was sent to you
>>>              in error
>>>              but does not contain patient information, please
>>>              contact the sender
>>>              and properly
>>>              dispose of the e-mail.
>>>
>>>
>>>
>>>
>>>              --
>>>              |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|
>>>
>>>              Alan N. Francis PhD
>>>              NIDA T32  Fellow in Computational Neuroscience
>>>              Brain Imaging Center
>>>              McLean Hospital
>>>              Harvard Medical School
>>>              115 Mill Street, Belmont, MA 02478
>>>              alanf@bwh.harvard.edu
>>>              afrancis@mclean.harvard.edu
>>>
>>>
>>>
>>>              |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|
>>>
>>>
>>> _______________________________________________
>>> Freesurfer mailing list
>>> Freesurfer@nmr.mgh.harvard.edu
>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>
>>>
>>> The information in this e-mail is intended only for the person to whom
>>> it is
>>> addressed. If you believe this e-mail was sent to you in error and the
>>> e-mail
>>> contains patient information, please contact the Partners Compliance
>>> HelpLine at
>>> http://www.partners.org/complianceline . If the e-mail was sent to you
>>> in error
>>> but does not contain patient information, please contact the sender
>>> and properly
>>> dispose of the e-mail.
>>>
>>>
>>>
>>>
>>> --
>>> |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|
>>>
>>> Alan N. Francis PhD
>>> NIDA T32  Fellow in Computational Neuroscience
>>> Brain Imaging Center
>>> McLean Hospital
>>> Harvard Medical School
>>> 115 Mill Street, Belmont, MA 02478
>>> alanf@bwh.harvard.edu
>>> afrancis@mclean.harvard.edu
>>>
>>>
>>> |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|
>>>
>>>
>> _______________________________________________
>> Freesurfer mailing list
>> Freesurfer@nmr.mgh.harvard.edu
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>
>>
>> The information in this e-mail is intended only for the person to whom it is
>> addressed. If you believe this e-mail was sent to you in error and the e-mail
>> contains patient information, please contact the Partners Compliance HelpLine at
>> http://www.partners.org/complianceline . If the e-mail was sent to you in error
>> but does not contain patient information, please contact the sender and properly
>> dispose of the e-mail.
>>
>> _______________________________________________
>> Freesurfer mailing list
>> Freesurfer@nmr.mgh.harvard.edu
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>
>>
>
>
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer