Dear Douglas,
Sorry! This is the previous information:
>
Dear Douglas,
>
>
Thank you for the replay.
>
>
I think so, I can't find the code 229 in any subject.
>
>
I can't see anything strange in the aparc+aseg.mgz. The cerebral voxels have the normal
> >
segmentation and labels. Could it be a problem with the extracerebral voxels?
>
>
Best regards,
>
Marina.
> That is kind of weird. It says it has found a segmentation with number
> 229, but we don't have that code in our system. Can you find the 229 voxels
> in the aparc+aseg.mgz?
> Dear experts,
>
> The following error occurs with one subject when I am running gtmseg
> command:
>
> Computing colortable
> ERROR: cannot find match for subcortical segid 229
> ERROR: mri_gtmseg -s qsm_04_year3 --usf 2 --o gtmseg.mgz --apas
> apas+head.mgz --no-subseg-wm --no-keep-cc --no-keep-hypo
> gtmseg existed with errors
> ans=1
>
> Do you know what happened with this subject? What can I do to solve it?
>
> Thank you very much in advance.
> Marina.