Hi,
I'm having trouble getting any output from the hippocampal subfield analysis command. I entered in:
quantifyHippocampalSubfields.sh T1 hippo.txt /path/to/my/subjects/freesurferfolder
I tried both ways of having the environmental variable subjects directory defined to the freesurfer folder of the subjects (used *'s here for subjects and their freesurfer folder), but it still gives no output.
It just says:
Gathering results from subjects in:
/path/to/my/subjects/freesurferfolder
Using the suffix name:
T1
And writing them to:
hippo.txt
What am I doing wrong here?
Thanks so much!
Batool