Dear experts,

I've finished FSv5.3 longitudinal analysis and I'm now running FSv6.0(beta) for hippocampal subfield features extraction (always on Ubuntu 14.01 environment).

After several trial I realized that before pipeline ends I've got the following error:

/opt/FreeSurfer-6-Beta/bin//mri_mask -T 0.5 T1resampled.mgz  hippoMaskResampledDilated.mgz T1resampled.mgz >/dev/null: Signal 127
Error using kvlGEMSMatlab
/cluster/koen/eugenio/GEMS/itkMGHImageIO.cxx:216:
itk::ERROR: MGHImageIO(0x7fe88bcda050): Can't find/open file: T1resampled.mgz

Error in kvlReadCroppedImage (line 11)

Error in segmentSubjectT1_autoEstimateAlveusML (line 588)

Could you help me?

Best

Daniele

PS: Even though one of the last row display " finished without error", no output is generated in the /mri/ folder.

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Daniele Orlandi, PsyD
IRCCS Fatebenefratelli
Via Pilastroni 4
25125 Brescia - Italy
tel: +39 030 35 01 563
e-mail: dorlandi@fatebenefratelli.eu