Hi Marisa, 

That should be possible. 

You can run the long pipeline up to that step, replace the corresponding files with your version and continue from there. 

Best, Martin

On 1. Oct 2020, at 10:32, Marisa Johanna Nordt <mnordt@stanford.edu> wrote:

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Hello, 

 

I have a question regarding the longitudinal pipeline: Is it possible to start the longitudinal pipeline after a template (using mri_robust_template) has already been created in a separate step? 

 

Thank you so much, 

 

Marisa 

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