Hi Sarah,

It doesn’t look like your recon-all is done processing yet from the attached recon-all.log.

You should also have these two files:

recon-all-status.log

recon-all.done

What did they report?

Thanks.

Yujing

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of O'Dor, Sarah,PhD
Sent: Tuesday, November 15, 2022 9:31 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] aseg.mgz not created

Good morning,

Recon-all finished without error, but no aseg.mgz file was created. I cannot find any errors in the recon-all.log (attached) to indicate what may have happened. Any suggestions on how to troublshoot this?

Thank you,

Sarah