Dear FreeSurfers,
I am using a Linux computer with FS 5.1 Due to
the known "feauture" in version 5.1 where "Control points may adversely
affect aseg" but also may alter the " subcortical segmentation", is it
acceptable to use the initial subcortical output (before adding control
points) for analysis, and then use the cortical volumetric output (after
control points have been added) from corrected brains? If this is
acceptable, any suggestions on how to phrase this for a paper without it
seeming like FreeSurfer has a bug?
Sincerely,
Mark