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Did you run this command “recon-all -s my_subject_id -qcache -measure pial_lgi” before? If not, you should run this.
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From: Avi Gharehgazlou
Sent: Tuesday, April 23, 2019 12:06 PM
To: Freesurfer support list
Subject: [Freesurfer] LGI in QDEC menu please respond soon
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Hi experts,
To give more detail re my previous post.... I have created the .Qdecrc file in my Subjects directory and QDEC folder, which contains one line : MEASURE1 = pial_lgi . However, LGI is still not appearing in the drop down menu on QDEC.
When I do command more ~/.Qdecrc it gives the following output:
# This file is automatically generated by the application
# If you change any lines or add new lines, note that all
# coments and empty lines will be deleted. Every line has
# to be in format:
# key = value
#
Qdec1\Dialogs\ExitApplication = 0
Qdec1\Dialogs\SendErrorLog = 0
Qdec1\Geometry\MainPanelSize = 375
Qdec1\Geometry\MainPanelVisibility = 1
Qdec1\Geometry\SaveUserInterfaceGeometry = 1
Qdec1\Geometry\SecondaryPanelSize = 250
Qdec1\Geometry\SecondaryPanelVisibility = 0
Qdec1\Geometry\ViewPanelPosition = Right
Qdec1\Geometry\WindowGeometry = 900x700+531+190
Qdec1\RunTime\MostRecentVersionLaunched = 1.5
Qdec1\RunTime\PrintTargetDPI = 100.000000
Qdec1\RunTime\ShowBalloonHelp = 1
Qdec1\RunTime\ShowSplashScreen = 1
Qdec1\RunTime\ToolbarFlatButtons = 1
Qdec1\RunTime\ToolbarFlatFrame = 1
Based on previous archives I think my .Qdecrc was not saved properly because the line in this file (MEASURE1 = pial_lgi) doesn't appear in the above output. I know I have to put this line in the above output, but I can't seem to figure out how. Will you please be able to tell me how I can do this?
Thanks so much