Hi folks!

I would like to use a different subject dirctory (setenv SUBJECTS_DIR <full path to subject dir>). Does freesurfer still finds the folders which are located in the default subjects directory of the FS installation? Or are they simply not needed for the recon-all process ? I refer to cvs_avg35 etc. not to the test data sets.

Please excuse if this question is stupid ... but considering the processsing time ...

Many thanks in advance,

Luke