Dear Naveen,

WMH-SynthSeg is currently only available in the development version of FreeSurfer.

I have updated the wiki with this information.

Apologies for the inconvenience.

/E

--

Juan Eugenio Iglesias

http://www.jeiglesias.com

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Byripudi Naveen Kumar ed20d402 <ed20d402@smail.iitm.ac.in>
Date: Friday, June 28, 2024 at 5:40 AM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Can find "mri_WMHsynthseg" command in freesurfer 7.4.1

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Dear freesurfer experts,

I was trying to use synthseg for segmenting and parcellating a heterogeneous brain with lesions. It is advised in the freesurfer synthseg webpage to use mri_WMHsynthseg command for these cases. How ever when I tried to run the command, it shows that command not found. I checked mri_synsthseg command works. What shall I do to resolve this? Is there a way to install the mri_WMHsynthseg or is it part of some existing commands? 

Regards,

Naveen Kumar