Hi doug,
Thanks very much doug.
rh.ttest.thickness.10.mgh is created from the mris_preproc to merge all the subjects' thickness into one file. Then group t-test can be done.
I try tksurfer -t rh.ttest.thickness.10.mgh, but the command window echoes its usage.
Just as you told me freeview has a new version to see time course for this file. I wonder where I can download it.
Thanks doug,
All the best.
Rujing Zha
 
2014-03-13

charujing123

发件人:Douglas Greve <greve@nmr.mgh.harvard.edu>
发送时间:2014-03-12 22:57
主题:Re: [Freesurfer] view time course in freeview
收件人:"freesurfer"<freesurfer@nmr.mgh.harvard.edu>
抄送:
 

But what is in rh.ttest.thickness.10.mgh? Is it a stack of all your subjects (the file you passed with --y to mri_glmfit)? If so, then add "-t rh.ttest.thickness.10.mgh" to your tksurfer command line. Ruopeng just added something to freeview to do it, but you'd have to get a new version

doug


On 3/11/14 9:46 PM, charujing123 wrote:
Hi doug,
sig.mgh is my result for two group t-test on pial thickness of whole brain. So I want to see the time course of thickness of rh.ttest.thickness.10.mgh vertex by vertex.
Thanks.
All the best.
Rujing Zha
2014-03-12

charujing123

发件人:Douglas N Greve <greve@nmr.mgh.harvard.edu>
发送时间:2014-03-12 00:16
主题:Re: [Freesurfer] view time course in freeview
收件人:"freesurfer"<freesurfer@nmr.mgh.harvard.edu>
抄送:
 
the time course of what? 
On 03/11/2014 07:18 AM, charujing123 wrote: 
> Hi FS experts, 
> For the sig.mgh, can I see the time course vertex by vertex in freeview? 
> Thanks. 
> All the best. 
> Rujing Zha 
> _______________________________________________ 
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