Hello all,

I was able to generate statistics on functional overlays but for some reason, the statistics do not have values after the structure name “Right-non-WM-hypointensities.”  Everything after this region listed has values of zero for the Mean, StdDev, Min, Max, and Range.  The command I used is listed below:

 

mri_segstats --brain-vol-from-seg --in subbj1.img --seg aseg-in-subj1.img --ctab-default --sum –subj1.output.txt

 

Is this a problem with the registration, the command line, or something else? 

Thank you for your help,

-Thang Nguyen