Hello Shujiro,

Our group has never used Canon scanners before, so unfortunately I don’t have any Canon-specific protocol I can point you to. Below is the link to our suggested T1 structural protocol as we have used/tested on Siemens scanners before. You could try to reproduce this protocol on your scanner using these parameters:

https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferWiki?action=AttachFile&do=get&target=FreeSurfer_Suggested_Morphometry_Protocols.pdf

Cheers,

Bill

From: <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of 南修司郎 <shujirominami@me.com>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Tuesday, November 10, 2020 at 5:35 PM
To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Canon MRI morphometry protocols

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Dear experts

We are trying to take MRI with Canon magnetic resonance for FreeSurfer analysis.

I'd appreciate If you could give me the recommended T1 structural protocol for Canon scanners.

Thank you in advance.

Shujiro

Shujiro Minami M.D., Ph.D.
Dpt. of Otolaryngology National Tokyo Medical Center
2-5-1 Higashigaoka, Meguro, Tokyo 152-8902, Japan
E-mail shujirominami@me.com