hi bruce and others:

i'm getting a recon failure on this particular brain: H0351.1009

the quality isn't great, but if you can take a quick look at the brain to see if you can spot any particular issues, that would be great.

4 of the others finished recon and 3 are almost there.

cheers,

satra

data location: http://human.brain-map.org/mri_viewers/data

command:  recon-all -subjid H0351.1009 -all -i /data/allen/H0351.1009/T1.nii.gz -openmp 8 -notalairach

==> /data/subjects/H0351.1009/scripts/recon-all-status.log <==
status file for recon-all
Fri Jul  5 00:02:39 UTC 2013
#@# MotionCor Fri Jul  5 00:02:43 UTC 2013
#@# Nu Intensity Correction Fri Jul  5 00:02:57 UTC 2013
#@# Intensity Normalization Fri Jul  5 00:04:45 UTC 2013
#@# Skull Stripping Fri Jul  5 00:07:53 UTC 2013
Linux node007 3.2.0-39-virtual #62-Ubuntu SMP Thu Feb 28 00:48:27 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux

recon-all -s H0351.1009 exited with ERRORS at Fri Jul  5 00:16:26 UTC 2013