# init-fsl test:
setenv SUBJECTS_DIR ~/bbreg_test

bbregister --s hd2155v1 --mov ~/bbreg_test/T2brain.nii.gz --reg ~/bbreg_test/init-fsl/fsl_register.dat --init-fsl --t2 > ~/bbreg_test/init-fsl/fsl_test.txt

tkregister2 --mov /home/tylers/bbreg_test/T2brain.nii.gz --reg /home/tylers/bbreg_test/init-fsl/fsl_register.dat --surf




# init-spm test:
setenv SUBJECTS_DIR ~/bbreg_test

bbregister --s hd2155v1 --mov ~/bbreg_test/T2brain.nii.gz --reg ~/bbreg_test/init-spm/spm_register.dat --init-spm --t2 > ~/bbreg_test/init-spm/spm_test.txt

tkregister2 --mov /home/tylers/bbreg_test/T2brain.nii.gz --reg /home/tylers/bbreg_test/init-spm/spm_register.dat --surf