Hi Rahul

If you have run the qcache stuff you can just run mri_average on all the individual subject thickness files since they are all mapped to fsaverage, then display them on fsaverage

Cheers

Bruce

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Yash Patel
Sent: Saturday, January 15, 2022 6:44 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Visualization of data

External Email - Use Caution

Hi Rahul,

If you fancy R… see blow

MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://cran.r-project.org/web/packages/fsbrain/vignettes/fsbrain.html

Cheers

Yash

Sent from my iPhone

On Jan 14, 2022, at 3:36 PM, Paul, Rahul <RPAUL7@mgh.harvard.edu> wrote:

Hi FreeSurfer experts,

I have a dataset of 60 patients. Is there a way to visualize the average cortical thickness/area for my dataset?

Thank you in advance.

Rahul

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