Hello FreeSurfer,

I have tried adding control points and running recon for the control points multiple times but no changes to the volume are made. Does anyone know what I could be doing wrong?

Thank you,

Anna




On Thu, May 2, 2013 at 2:16 PM, Gonzalo Rojas Costa <gonzalo.rojas.costa@gmail.com> wrote:
Hi Bruce:

  I tested 4.5 and 5.1 versions... with the first I processed
complete, and with 5.1 only autorecon1 section...

  Sincerely,


Gonzalo Rojas Costa


On Thu, May 2, 2013 at 1:31 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
> what version are you running? The newer ones are *much* better at this
> Bruce
>
> On Thu, 2 May 2013, Gonzalo Rojas Costa wrote:
>
>> Hi:
>>
>>  I has the MPRAGE of a patient with one big ventricle, and the other
>> has normal shape and size... Any tip and tricks to process it ?...
>> Because freesurfer fails from the beggining of the process (VERY BAD
>> talairach registration)... I test -bigventricle option of recon-all,
>> but I got the same problems...
>>
>>  Sincerely,
>>
>> --
>> Gonzalo Rojas Costa
>> Laboratory for Advanced Medical Image Processing
>> Department of Radiology
>> Clínica las Condes
>> Lo Fontecilla 441, Las Condes, Santiago, Chile.
>> Tel: 56-2-2105170
>> Cel: 56-9-97771785
>> www.clc.cl
>>
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>>
>>
>>
>
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--
Gonzalo Rojas Costa
Laboratory for Advanced Medical Image Processing
Department of Radiology
Clínica las Condes
Lo Fontecilla 441, Las Condes, Santiago, Chile.
Tel: 56-2-2105170
Cel: 56-9-97771785
www.clc.cl

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