Dear Freesurfer Experts,
 
I recently installed freesurfer. In my first subject, it did the largest part of the calculations (recon-all all) but ended up with the following error:
 

#@# Cortical ribbon mask Tue May 12 22:29:18 CEST 2009
/Applications/freesurfer/subjects/sleep001_RJ/mri
\n mris_volmask --label_left_white 2 --label_left_ribbon 3 --label_right_white 41 --label_right_ribbon 42 --save_ribbon --save_distance sleep001_RJ \n
dyld: Library not loaded: /usr/X11/lib/libfontconfig.1.dylib
  Referenced from: /Applications/freesurfer/lib/vtk/lib/vtk-5.2/libvtkHybrid.5.2.dylib
  Reason: Incompatible library version: libvtkHybrid.5.2.dylib requires version 5.0.0 or later, but libfontconfig.1.dylib provides version 3.0.0
Trace/BPT trap
Darwin hpsystem.kispi.int 9.2.2 Darwin Kernel Version 9.2.2: Tue Mar  4 21:17:34 PST 2008; root:xnu-1228.4.31~1/RELEASE_I386 i386

recon-all exited with ERRORS at Tue May 12 22:29:20 CEST 2009

 

 

How can I fix this incompatibility?

 

 

Best regards

Andreas

 

 

 

Error log:

 

SUBJECT sleep001_RJ
DATE Tue May 12 22:29:20 CEST 2009
USER EGI
HOST hpsystem.kispi.int
PROCESSOR i386
OS Darwin
Darwin hpsystem.kispi.int 9.2.2 Darwin Kernel Version 9.2.2: Tue Mar  4 21:17:34 PST 2008; root:xnu-1228.4.31~1/RELEASE_I386 i386
$Id: recon-all,v 1.133.2.42 2009/04/01 15:53:05 nicks Exp $
/Applications/freesurfer/bin/recon-all
PWD /Applications/freesurfer/subjects/sleep001_RJ/mri
CMD mris_volmask --label_left_white 2 --label_left_ribbon 3 --label_right_white 41 --label_right_ribbon 42 --save_ribbon --save_distance sleep001_RJ

IMPORTANT: The contents of this email and any attachments are confidential. They are intended for the named recipient(s) only.
If you have received this email in error, please notify the system manager or the sender immediately and do not disclose the contents to anyone or make copies thereof.
*** eSafe scanned this email for viruses, vandals, and malicious content. ***