Hi there,

 

I’ve been trying run recon-all on this public dataset MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://link.springer.com/article/10.1007/s12021-017-9338-9  and I cant seem to complete the autorecon3 stage for any of the subjects. I’ve attached the log file.

 

I’m using freesurfer-linux-centos7_x86_64-7.2.0-20210720-aa8f76b

 

#--------------------------------------------

#@# BA_exvivo Labels lh Mon Jan  9 05:39:18 +08 2023

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ERROR: Label BA1_exvivo does not exist in SUBJECTS_DIR fsaverage!

       The fsaverage link probably points to an older freesurfer version

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Linux hpc-gekko1 3.10.0-693.el7.x86_64 #1 SMP Tue Aug 22 21:09:27 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux

 

recon-all -s sub-A00000300 exited with ERRORS at Mon Jan  9 05:39:18 +08 2023

 

 

I’ve also tried to recon-all with freesurfer 7.3.2. however I got stuck at the autorecon2 stage instead

 

ERROR: cannot find or read transforms/talairach.m3z error: No such file or directory error: transforms/talairach.m3z: could not open transform

 

I’m wondering if there is anything wrong with the data? The input file can be downloaded here MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://drive.google.com/file/d/1us8Oe6NH5DedbajaE0LwFqb58jwxBJU2/view?usp=sharing

 

 

Thanks

Junhong