If you run mri_info on the image, what does it report?
Can you send recon-all.log?
Yujing
From: andrew cardona <ascardona0908@gmail.com>
Sent: Thursday, June 26, 2025 11:17 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Trouble shooting
External Email - Use Caution
Good morning,
I am trying to troubleshoot one participant, yet It keeps failing and starting this error “ mri_convert : can’t determine type of output volume” we have tried changing the file manually to mgz and it works yet when running recon all it
crashes. Any guidance would be appreciated! Thank you in advance!
Best,
Andrew cardona