INFO: analysis cond_fsavSurf_l_sm5 exists, but overwrite forced by user. Setting TER to 0.050196 Setting TimeWindow to 39.956016 Setting PreStim to 0 Setting PostStim to 39.956016 # FSBUILD freesurfer-linux-centos7_x86_64-7.1.1-20200723-8b40551 # MKAVERSION mkanalysis-sess 7.1.1 # MKACMD /autofs/cluster/neuromod/programs/freesurfer_7.1.1/freesurfer/fsfast/bin/mkanalysis-sess -no-mask -paradigm events.txt -tpexclude tpef.txt -nuisreg MotConfounds.txt 12 -mni305 -analysis cond_fsavSurf_l_sm5 -per-run -polyfit 2 -event-related -TR 2.56 -fsd cond -refeventdur 6 -spmhrf 0 -nconditions 12 -force -funcstem fmcpr.sm5.fsaverage.lh.nii.gz # DATE Wed Jun 16 11:28:38 EDT 2021 analysis cond_fsavSurf_l_sm5 mcstem fmcpr funcstem fmcpr.sm5.fsaverage.lh.nii.gz fsd cond TR 2.56 RegDOF 6 PerSession 0 RawSpace volume mni305 2 mask nomask RawFWHM 0 RawSTC none nSliceGroups 1 UseB0DC 0 ApplySubCortMask 1 inorm 100 acfbins 30 fixacf 1 acffwhm 20 acfsvd 0 designtype event-related tpexclude tpef.txt nskip 0 polyfit 2 HPFCutoffHz 0 HeteroGCor 0 nconditions 12 parname events.txt RefEventDur 6 timewindow 39.956016 prestim 0 TER 0.050196 spmhrf 0 stimulusdelay -1.28000000000000000000 Condition 1 Condition01 Condition 2 Condition02 Condition 3 Condition03 Condition 4 Condition04 Condition 5 Condition05 Condition 6 Condition06 Condition 7 Condition07 Condition 8 Condition08 Condition 9 Condition09 Condition 10 Condition10 Condition 11 Condition11 Condition 12 Condition12 nuisreg MotConfounds.txt 12 mkanalysis-sess done INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/CX.config -anadir cond_fsavSurf_l_sm5 -wcond 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/CX.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/CX.mat nconds 12, wcond 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/CX.mat monly 0 NCond 12 WCond 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.88351.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:28:55 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/eCS+1.config -anadir cond_fsavSurf_l_sm5 -wcond 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/eCS+1.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/eCS+1.mat nconds 12, wcond 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/eCS+1.mat monly 0 NCond 12 WCond 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.90152.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:29:06 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/eCS+2.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/eCS+2.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/eCS+2.mat nconds 12, wcond 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/eCS+2.mat monly 0 NCond 12 WCond 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.91947.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:29:17 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/eCS-atCS+1.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/eCS-atCS+1.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/eCS-atCS+1.mat nconds 12, wcond 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/eCS-atCS+1.mat monly 0 NCond 12 WCond 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.93749.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:29:28 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/eCS-atCS+2.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/eCS-atCS+2.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/eCS-atCS+2.mat nconds 12, wcond 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/eCS-atCS+2.mat monly 0 NCond 12 WCond 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.95535.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:29:39 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/lCS+1.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/lCS+1.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/lCS+1.mat nconds 12, wcond 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/lCS+1.mat monly 0 NCond 12 WCond 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.97330.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:29:50 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/lCS+2.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/lCS+2.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/lCS+2.mat nconds 12, wcond 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/lCS+2.mat monly 0 NCond 12 WCond 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.99119.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:30:02 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/lCS-atCS+1.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/lCS-atCS+1.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/lCS-atCS+1.mat nconds 12, wcond 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/lCS-atCS+1.mat monly 0 NCond 12 WCond 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.100930.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:30:13 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/lCS-atCS+2.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 -sumconds -o cond_fsavSurf_l_sm5/lCS-atCS+2.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/lCS-atCS+2.mat nconds 12, wcond 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/lCS-atCS+2.mat monly 0 NCond 12 WCond 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.102731.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:30:24 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 mkcontrast2 -config cond_fsavSurf_l_sm5/NOShock_1.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 -sumconds -o cond_fsavSurf_l_sm5/NOShock_1.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/NOShock_1.mat nconds 12, wcond 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/NOShock_1.mat monly 0 NCond 12 WCond 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.104517.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:30:35 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 mkcontrast2 -config cond_fsavSurf_l_sm5/omittedSck_1.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 -sumconds -o cond_fsavSurf_l_sm5/omittedSck_1.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/omittedSck_1.mat nconds 12, wcond 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/omittedSck_1.mat monly 0 NCond 12 WCond 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 0 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.106304.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:30:46 EDT 2021 INFO: Found 12 Non-Null Conditions INFO: Found 1 Delays Condition Weights: 0 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 mkcontrast2 -config cond_fsavSurf_l_sm5/shock.config -anadir cond_fsavSurf_l_sm5 -wcond 0 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 -sumconds -o cond_fsavSurf_l_sm5/shock.mat -prestim 0 -wdelay 1 -no-octave mkcontrast2 7.1.1 cmtxfile cond_fsavSurf_l_sm5/shock.mat nconds 12, wcond 0 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 ndelays 1, wdelay 1 ndelays 1, wpsa sumconds 1 sumdelays 0 nircorr 0 TER 0.050196 rdelta rtau cmtxfile cond_fsavSurf_l_sm5/shock.mat monly 0 NCond 12 WCond 0 0 0 0 0 0 0 0 0 0 0 1.00000000000000000000 NDelay 1 WDelay 1 TER 0.050196 sumconds 1 sumdelays 0 nircorr 0 TPreStim 0 RmPreStim 0 rdelta 0 0 rtau 0 0 ndelays 1 CNorm 1 setwdelay 0 setwcond 0 Matlab file is /tmp/mkcontrast2.108098.m ------- matlab output -------------------- MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2020 The MathWorks, Inc. R2020b (9.9.0.1467703) 64-bit (glnxa64) August 26, 2020 To get started, type doc. For product information, visit www.mathworks.com. >> starting mkcontrast2m Normalizing contrast matrix mkcontrast2m done >> Wed Jun 16 11:30:57 EDT 2021