Hi Vinny,

The anatomical definitions can be found in the paper, which is open access (see Table 2):

https://www.sciencedirect.com/science/article/pii/S1053811918307109

Kind regards

Eugenio

From: Vinny K

Sent: Monday, September 10, 10:35

Subject: Re: [Freesurfer] thalamic segmentation

To: freesurfer@nmr.mgh.harvard.edu

        External Email - Use Caution        

Hi,

I ran recon-all to generate the required files for the thalamic segmentation tool (http://freesurfer.net/fswiki/ThalamicNuclei) using the latest development version of Freesurfer (06/09/2018) linux-cent06.  The segmented thalamic nuclei were visualized but I could not find a table listing the thalamic nuclei and its associated label to help identify the specific nuclei.

Any help would be greatly appreciated.

Thanks,

Vinny