Maheen,

it sounds like a question that could be better answered by the Homer2 list.

hth
d

On Fri, Feb 26, 2016 at 8:13 AM, Maheen Siddiqui
<maheen.siddiqui91@gmail.com> wrote:
> Dear FreeSurfer Users,
>
> I have a head surface mesh and a pial surface mesh obtained after
> segmentation of a T1 MRI scan. I am going to importing these into Homer2
> Atlas Viewer as subject anatomy.
>
> However before I can do this import successfully, I need to bring the two
> meshes into the same coordinate system. At the moment they are in different
> coordinate systems (as pictured) and I need to bring the pial surface mesh
> into the head surface mesh. I am a little unsure how to do this.
>
> Does anybody have any experience with this? Or any advice on what I could do
> possibly?
>
> Thanks,
>
> Maheen
>

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