When you say that it doesn't work, what do you mean? I was able to run your command line successfully in 7.1.1


On 12/18/2024 7:34 PM, Zeng, Victor (BIDMC - Keshavan - Psychiatry) wrote:

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Hi guys,

I need to extract the eTIV from a stats file 

Its like this: 

# Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1667606.252292, mm^3

According to MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://surfer.nmr.mgh.harvard.edu/fswiki/eTIV, typing 
mri_segstats --subject subjid --etiv-only

Doesn't work for FS7.1.1. Also the --etiv flag in mri_segstats doesn't seem to work either. And the --etiv flag in asegstats2table. 
I also tried figuring how its done in recon-all.log but just need the eTIV and no other stats. Whats the best FS command to do this in FS7.1.1? 



Victor Zeng
Beth Israel Deaconess Medical Center
PI: Keshavan, Lizano, Bolo

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