Hi Fereshte,

mri_watershed -LABEL inputvolume.mgz outputvolume.mgz

The output volume will contain 6 labels:
0 = exterior
1 = scalp
2 = skull
3 = csf
4 = gray
5 = white
6 = fat tissue

Emma

> On Oct 11, 2017, at 3:38 AM, Fereshte <fereshte.ramezani@gmail.com> wrote:
>
> Dear Experts,
> How is it possible to extract labels like scalp and skull using -LABEL flag in mri_watershed ?
> Thanks for your attention.
>
>
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