Dear Doug, dear freesurfers,

thank you very much! If I'd like to change the orientation (from PSR to LAS), is there a way in Freesurfer to do it?
Thanks again!

Best,
Brigitte

2013/6/20 Douglas Greve <greve@nmr.mgh.harvard.edu>

If you just want to check the orientation, then you can run mri_info. It will not tell you whether the orientation is correct or not, but neither will fslhd
doug

On 6/19/13 11:18 AM, Bruce Fischl wrote:

Hi Brigette,

not sure how you could do this except visually. Bring the images up and verify that the directions that we specify are correct (although of course this isn't possible for L/R unless you have some type of external fiducial marker like a vitamin E tablet)

cheers
Bruce
On Wed, 19 Jun 2013, Brigitte Dahmen wrote:

Dear Freesurfer experts,

is there a command in Freesurfer to check for correct orientation (LAS vs.
PSR) of T1 images (similar to "fslhd" in FSL)? 

Thank you very much!
Brigitte

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