Hello FreeSurfer Developers,

 

I hope you are well. I’m attempting to apply an .lta file generated by mri_robust register. The files I want to apply the transform on are GRE phase maps, so I don’t want to do any resampling.

 

I was looking around mri_vol2vol, but all the examples seem to involve resampling to a target scan. How would I go about this if I simple want to apply this linear transform on the phase maps (nii) in freesurfer?

 

1. Freesurfer version 7.3.0
2. Platform: CentOS Version 7

 

Sincerely,

 

Daniel Balentine

 

Data Analyst

Athinoula A Martinos Center for Biomedical Imaging

Massachusetts General Hospital

149 - 13th Street

Charlestown, MA 02129

dbalentine@mgh.harvard.edu