External Email - Use Caution        

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Hello experts,

 

I am doing cerebellar segmentation from one of my previous posts using the command:

isolate_labels.csh --vol aparc+aseg.mgz --outprefix aparc+aseg_labels --L $label 7,8,46,47

 

Following the command I am getting an expression syntax error:

 

Akilas-MacBook-Air:B301001 akilasekar$ isolate_labels.csh --vol aparc+aseg.mgz --outprefix aparc+aseg_labels --L $label 7,8,46,47

Input file: aparc+aseg.mgz

Output prefix: aparc+aseg_labels

mri_convert aparc+aseg.mgz aparc+aseg.nii.gz 

reading from aparc+aseg.mgz...

TR=0.00, TE=0.00, TI=0.00, flip angle=0.00

i_ras = (-1, 0, 0)

j_ras = (0, 0, -1)

k_ras = (0, 1, 0)

writing to aparc+aseg.nii.gz...

Label of interest:  7,8,46,47

@: Expression Syntax.

 

It would be great if you can help me solve this. Thanks!

 

Akila

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